Pseudomonas protegens Pf-5, PFL_6098

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6098
Name
Replicon chromosome
Genomic location 6930535 - 6930828 (- strand)

Cross-References

RefSeq YP_263156.1
GI 70733381
Entrez 3480468
INSDC AAY95286.1
NCBI Locus Tag PFL_6098
UniParc UPI000054E289
UniProtKB Acc Q4K3M7
UniProtKB ID Q4K3M7_PSEF5
UniRef100 UniRef100_Q4K3M7
UniRef50 UniRef50_Q4K3M7
UniRef90 UniRef90_Q4K3M7

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.01
Kyte-Doolittle Hydrophobicity Value -0.177
Molecular Weight (kDa) 11041.5
Isoelectric Point (pI) 4.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019660 (31 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6098

Human Homologs

References

No references are associated with this feature.