Pseudomonas protegens Pf-5, PFL_6123

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6123
Name
Replicon chromosome
Genomic location 6954040 - 6954576 (- strand)

Cross-References

RefSeq YP_263181.1
GI 70733406
Entrez 3480493
INSDC AAY95311.1
NCBI Locus Tag PFL_6123
UniParc UPI000054E2A1
UniProtKB Acc Q4K3K2
UniProtKB ID Q4K3K2_PSEF5
UniRef100 UniRef100_Q4K3K2
UniRef50 UniRef50_Q9HTE1
UniRef90 UniRef90_Q4K3K2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.59
Kyte-Doolittle Hydrophobicity Value -0.140
Molecular Weight (kDa) 19.5
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 54 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004976 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6123

Human Homologs

References

No references are associated with this feature.