Pseudomonas protegens Pf-5, PFL_6170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6170
Name
Replicon chromosome
Genomic location 7008920 - 7009312 (+ strand)

Cross-References

RefSeq YP_263228.1
GI 70733453
Entrez 3480540
INSDC AAY95358.1
NCBI Locus Tag PFL_6170
UniParc UPI000054E2D0
UniProtKB Acc Q4K3F5
UniProtKB ID Q4K3F5_PSEF5
UniRef100 UniRef100_Q4K3F5
UniRef50 UniRef50_Q4K3F5
UniRef90 UniRef90_Q4K3F5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 4.64
Kyte-Doolittle Hydrophobicity Value -0.298
Molecular Weight (kDa) 14928.1
Isoelectric Point (pI) 9.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 34 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005053 (417 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6170

Human Homologs

References

No references are associated with this feature.