Pseudomonas protegens Pf-5, PFL_6182

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6182
Name
Replicon chromosome
Genomic location 7018498 - 7019058 (+ strand)

Cross-References

RefSeq YP_263240.1
GI 70733465
Entrez 3480552
INSDC AAY95370.1
NCBI Locus Tag PFL_6182
UniParc UPI000054E2DC
UniProtKB Acc Q4K3E3
UniProtKB ID Q4K3E3_PSEF5
UniRef100 UniRef100_Q4K3E3
UniRef50 UniRef50_Q39AS6
UniRef90 UniRef90_K9NRA6

Product

Feature Type CDS
Coding Frame 1
Product Name
carbonate dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -2.90
Kyte-Doolittle Hydrophobicity Value 0.101
Molecular Weight (kDa) 19.7
Isoelectric Point (pI) 5.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 494 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005073 (397 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6182

Human Homologs

References

No references are associated with this feature.