Pseudomonas protegens Pf-5, PFL_6213 (glmR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6213
Name
glmR
Replicon chromosome
Genomic location 7053480 - 7054247 (- strand)

Cross-References

RefSeq YP_263271.1
GI 70733496
Entrez 3480583
INSDC AAY95401.1
NCBI Locus Tag PFL_6213
UniParc UPI000054E2FB
UniProtKB Acc Q4K3B2
UniProtKB ID Q4K3B2_PSEF5
UniRef100 UniRef100_Q4K3B2
UniRef50 UniRef50_Q9HT24
UniRef90 UniRef90_Q4K3B2

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator GlmR
Synonyms
Evidence for Translation
Charge (pH 7) -6.82
Kyte-Doolittle Hydrophobicity Value -0.056
Molecular Weight (kDa) 28.0
Isoelectric Point (pI) 5.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 342 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005081 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6213
Search term: glmR

Human Homologs

References

No references are associated with this feature.