Strain |
Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest |
Locus Tag |
PFLCHA0_c00230
|
Name |
def1
|
Replicon | chromosome |
Genomic location | 24339 - 24980 (- strand) |
RefSeq | YP_007997334.1 |
GI | 501677508 |
EC Number | 3.5.1.88 |
Entrez | 15557939 |
NCBI Locus Tag | PFLCHA0_c00230 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
peptide deformylase Def
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 2.32 |
Kyte-Doolittle Hydrophobicity Value | -0.427 |
Molecular Weight (kDa) | 24566.1 |
Isoelectric Point (pI) | 7.99 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
1IX1 | HYDROLASE | 06/07/02 | Crystal Structure of P.aeruginosa Peptide deformylase Complexed with Antibiotic Actinonin | Pseudomonas aeruginosa | 1.85 | X-RAY DIFFRACTION | 91.1 |
1S17 | HYDROLASE | 01/05/04 | Identification of Novel Potent Bicyclic Peptide Deformylase Inhibitors | Pseudomonas aeruginosa | 1.95 | X-RAY DIFFRACTION | 91.6 |
1N5N | HYDROLASE | 11/06/02 | Crystal Structure of Peptide Deformylase from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.8 | X-RAY DIFFRACTION | 91.6 |
1LRY | HYDROLASE | 05/16/02 | Crystal Structure of P. aeruginosa Peptide Deformylase Complexed with Antibiotic Actinonin | Pseudomonas aeruginosa | 2.6 | X-RAY DIFFRACTION | 91.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 587 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000019 (537 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c00230
Search term: def1
Search term: peptide deformylase Def
|