Pseudomonas protegens CHA0, PFLCHA0_c00280 (hemF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c00280
Name
hemF
Replicon chromosome
Genomic location 29025 - 29942 (+ strand)

Cross-References

RefSeq YP_007997339.1
GI 501677513
EC Number 1.3.3.3
Entrez 15557944
NCBI Locus Tag PFLCHA0_c00280

Product

Feature Type CDS
Coding Frame 1
Product Name
coproporphyrinogen-III oxidase, aerobic
Synonyms
Evidence for Translation
Charge (pH 7) -6.71
Kyte-Doolittle Hydrophobicity Value -0.422
Molecular Weight (kDa) 34.4
Isoelectric Point (pI) 5.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 278 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000024 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c00280
Search term: hemF

Human Homologs

Ensembl 97, assembly GRCh38.p12
coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:HGNC:2321]
E-value: 5.4e-74
Percent Identity: 45.7

References

No references are associated with this feature.