Pseudomonas protegens CHA0, PFLCHA0_c01300
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest |
| Locus Tag |
PFLCHA0_c01300
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 137190 - 137882 (+ strand) |
Cross-References
| RefSeq | YP_007997436.1 |
| GI | 501677610 |
| Entrez | 15558046 |
| NCBI Locus Tag | PFLCHA0_c01300 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.13 |
| Kyte-Doolittle Hydrophobicity Value | -0.282 |
| Molecular Weight (kDa) | 26.3 |
| Isoelectric Point (pI) | 8.63 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4U65 | Transferase/Hydrolase | 07/27/14 | Structure of the periplasmic output domain of the Legionella pneumophila LapD ortholog CdgS9 in complex with Pseudomonas fluorescens LapG | Legionella pneumophila subsp. pneumophila; Pseudomonas fluorescens | 2.1 | X-RAY DIFFRACTION | 90.9 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 78 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001351 (456 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c01300
|
Human Homologs
References
No references are associated with this feature.