Pseudomonas protegens CHA0, PFLCHA0_c06780 (dusB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c06780
Name
dusB
Replicon chromosome
Genomic location 781254 - 782267 (- strand)

Cross-References

RefSeq YP_007997981.1
GI 501678155
EC Number 1.-.-.-
Entrez 15558594
NCBI Locus Tag PFLCHA0_c06780

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA-dihydrouridine synthase B
Synonyms
Evidence for Translation
Charge (pH 7) -1.95
Kyte-Doolittle Hydrophobicity Value -0.049
Molecular Weight (kDa) 36.4
Isoelectric Point (pI) 6.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 563 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004481 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c06780
Search term: dusB

Human Homologs

Ensembl 110, assembly GRCh38.p14
dihydrouridine synthase 3 like [Source:HGNC Symbol;Acc:HGNC:26920]
E-value: 1.3e-24
Percent Identity: 30.9
Ensembl 110, assembly GRCh38.p14
dihydrouridine synthase 3 like [Source:HGNC Symbol;Acc:HGNC:26920]
E-value: 1.3e-24
Percent Identity: 30.9

References

No references are associated with this feature.