Pseudomonas protegens CHA0, PFLCHA0_c13320 (braF2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas protegens CHA0
GCF_000397205.1|latest |
| Locus Tag |
PFLCHA0_c13320
|
| Name |
braF2
|
| Replicon | chromosome |
| Genomic location | 1484276 - 1485043 (- strand) |
Cross-References
| RefSeq | YP_007998626.1 |
| GI | 501678800 |
| Entrez | 15559248 |
| NCBI Locus Tag | PFLCHA0_c13320 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
high-affinity branched-chain amino acid transport ATP-binding protein BraF
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 4.38 |
| Kyte-Doolittle Hydrophobicity Value | -0.095 |
| Molecular Weight (kDa) | 28.2 |
| Isoelectric Point (pI) | 9.07 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001033 (550 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c13320
Search term: braF2
|
Human Homologs
|
Ensembl
97, assembly
GRCh38.p12
|
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value:
1.8e-17
Percent Identity:
26.2
|
|
Ensembl
97, assembly
GRCh38.p12
|
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value:
1.8e-17
Percent Identity:
26.2
|
|
Ensembl
97, assembly
GRCh38.p12
|
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value:
1.8e-17
Percent Identity:
26.2
|
|
Ensembl
97, assembly
GRCh38.p12
|
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value:
1.8e-17
Percent Identity:
26.2
|
|
Ensembl
97, assembly
GRCh38.p12
|
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value:
1.8e-17
Percent Identity:
26.2
|
|
Ensembl
97, assembly
GRCh38.p12
|
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value:
1.8e-17
Percent Identity:
26.2
|
|
Ensembl
97, assembly
GRCh38.p12
|
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value:
1.8e-17
Percent Identity:
26.2
|
|
Ensembl
97, assembly
GRCh38.p12
|
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value:
1.8e-17
Percent Identity:
26.2
|
References
No references are associated with this feature.