Pseudomonas protegens CHA0, PFLCHA0_c13320 (braF2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c13320
Name
braF2
Replicon chromosome
Genomic location 1484276 - 1485043 (- strand)

Cross-References

RefSeq YP_007998626.1
GI 501678800
Entrez 15559248
NCBI Locus Tag PFLCHA0_c13320

Product

Feature Type CDS
Coding Frame 1
Product Name
high-affinity branched-chain amino acid transport ATP-binding protein BraF
Synonyms
Evidence for Translation
Charge (pH 7) 4.38
Kyte-Doolittle Hydrophobicity Value -0.095
Molecular Weight (kDa) 28.2
Isoelectric Point (pI) 9.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001033 (550 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c13320
Search term: braF2

Human Homologs

Ensembl 97, assembly GRCh38.p12
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value: 1.8e-17
Percent Identity: 26.2
Ensembl 97, assembly GRCh38.p12
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value: 1.8e-17
Percent Identity: 26.2
Ensembl 97, assembly GRCh38.p12
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value: 1.8e-17
Percent Identity: 26.2
Ensembl 97, assembly GRCh38.p12
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value: 1.8e-17
Percent Identity: 26.2
Ensembl 97, assembly GRCh38.p12
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value: 1.8e-17
Percent Identity: 26.2
Ensembl 97, assembly GRCh38.p12
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value: 1.8e-17
Percent Identity: 26.2
Ensembl 97, assembly GRCh38.p12
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value: 1.8e-17
Percent Identity: 26.2
Ensembl 97, assembly GRCh38.p12
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value: 1.8e-17
Percent Identity: 26.2

References

No references are associated with this feature.