Pseudomonas protegens CHA0, PFLCHA0_c21480 (rbsA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c21480
Name
rbsA
Replicon chromosome
Genomic location 2364530 - 2366083 (+ strand)

Cross-References

RefSeq YP_007999424.1
GI 501679598
EC Number 3.6.3.17
Entrez 15560064
NCBI Locus Tag PFLCHA0_c21480

Product

Feature Type CDS
Coding Frame 1
Product Name
ribose import ATP-binding protein RbsA
Synonyms
Evidence for Translation
Charge (pH 7) -12.68
Kyte-Doolittle Hydrophobicity Value 0.066
Molecular Weight (kDa) 55519.9
Isoelectric Point (pI) 4.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000134 (908 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c21480
Search term: rbsA

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value: 5.4e-09
Percent Identity: 22.9
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value: 5.4e-09
Percent Identity: 22.9

References

No references are associated with this feature.