Strain |
Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest |
Locus Tag |
PFLCHA0_c32700
|
Name |
bepE
|
Replicon | chromosome |
Genomic location | 3656038 - 3659217 (+ strand) |
RefSeq | YP_008000544.1 |
GI | 501680718 |
Entrez | 15561186 |
NCBI Locus Tag | PFLCHA0_c32700 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
efflux pump membrane transporter BepE
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -8.67 |
Kyte-Doolittle Hydrophobicity Value | 0.316 |
Molecular Weight (kDa) | 115.0 |
Isoelectric Point (pI) | 5.65 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
adeF | AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] | ARO:3000777 | protein homolog model | Strict | 1347.8 | 67.27 | 3.2.5 |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 489 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000417 (2093 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c32700
Search term: bepE
Search term: efflux pump membrane transporter BepE
|