Pseudomonas protegens CHA0, PFLCHA0_c38570
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest |
| Locus Tag |
PFLCHA0_c38570
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4343368 - 4344204 (- strand) |
Cross-References
| RefSeq | YP_008001127.1 |
| GI | 501681301 |
| Entrez | 15561773 |
| NCBI Locus Tag | PFLCHA0_c38570 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.18 |
| Kyte-Doolittle Hydrophobicity Value | -0.368 |
| Molecular Weight (kDa) | 31.6 |
| Isoelectric Point (pI) | 6.23 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 1SQ4 | STRUCTURAL GENOMICS, UNKNOWN FUNCTION | 03/17/04 | Crystal Structure of the Putative Glyoxylate Induced Protein from Pseudomonas aeruginosa, Northeast Structural Genomics Target PaR14 | Pseudomonas aeruginosa | 2.7 | X-RAY DIFFRACTION | 91.4 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 74 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001100 (381 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c38570
|
Human Homologs
References
No references are associated with this feature.