Pseudomonas protegens CHA0, PFLCHA0_c42860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c42860
Name
Replicon chromosome
Genomic location 4857547 - 4857768 (+ strand)

Cross-References

RefSeq YP_008001549.1
GI 501681723
Entrez 15562202
NCBI Locus Tag PFLCHA0_c42860

Product

Feature Type CDS
Coding Frame 1
Product Name
putative lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -1.05
Kyte-Doolittle Hydrophobicity Value -0.349
Molecular Weight (kDa) 8.1
Isoelectric Point (pI) 4.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2K57 structural genomics, unknown function 06/25/08 Solution NMR Structure of Putative Lipoprotein from Pseudomonas syringae Gene Locus PSPTO2350. Northeast Structural Genomics Target PsR76A. Pseudomonas syringae pv. phaseolicola 1448A NOT SOLUTION NMR 92.3

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 28 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002554 (842 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c42860

Human Homologs

References

No references are associated with this feature.