Pseudomonas protegens CHA0, PFLCHA0_c59070 (ydeS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c59070
Name
ydeS
Replicon chromosome
Genomic location 6558985 - 6559587 (- strand)

Cross-References

RefSeq YP_008003139.1
GI 501683313
Entrez 15563824
NCBI Locus Tag PFLCHA0_c59070

Product

Feature Type CDS
Coding Frame 1
Product Name
HTH-type transcriptional regulator YdeS
Synonyms
Evidence for Translation
Charge (pH 7) 0.33
Kyte-Doolittle Hydrophobicity Value -0.326
Molecular Weight (kDa) 22.9
Isoelectric Point (pI) 7.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 164 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020998 (20 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c59070
Search term: ydeS

Human Homologs

References

No references are associated with this feature.