Pseudomonas poae RE_1-1-14, H045_00920

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_00920
Name
Replicon chromosome
Genomic location 202136 - 203530 (- strand)

Cross-References

RefSeq YP_007395756.1
GI 447915188
Entrez 14501988
INSDC AGE24260.1
NCBI Locus Tag H045_00920
UniParc UPI0002A79B25
UniProtKB Acc M4K0R0
UniProtKB ID M4K0R0_9PSED
UniRef100 UniRef100_M4K0R0
UniRef50 UniRef50_A0A0B7D6X5
UniRef90 UniRef90_M4K0R0

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin, OprD family protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.60
Kyte-Doolittle Hydrophobicity Value -0.490
Molecular Weight (kDa) 50.8
Isoelectric Point (pI) 6.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 19 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004088 (487 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_00920

Human Homologs

References

No references are associated with this feature.