Pseudomonas poae RE_1-1-14, H045_01575

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_01575
Name
Replicon chromosome
Genomic location 338508 - 339476 (- strand)

Cross-References

RefSeq YP_007395887.1
GI 447915319
Entrez 14502119
INSDC AGE24391.1
NCBI Locus Tag H045_01575
UniParc UPI0002A7B6B0
UniProtKB Acc M4JWM9
UniProtKB ID M4JWM9_9PSED
UniRef100 UniRef100_M4JWM9
UniRef50 UniRef50_Q13P85
UniRef90 UniRef90_C3KDQ1

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.99
Kyte-Doolittle Hydrophobicity Value -0.031
Molecular Weight (kDa) 35.2
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 468 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000157 (872 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_01575

Human Homologs

References

No references are associated with this feature.