Pseudomonas poae RE_1-1-14, H045_02895 (rimO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_02895
Name
rimO
Replicon chromosome
Genomic location 626374 - 627714 (- strand)

Cross-References

RefSeq YP_007396151.1
GI 447915583
Entrez 14502383
INSDC AGE24655.1
NCBI Locus Tag H045_02895
UniParc UPI00025E9530
UniProtKB Acc M4K1X5
UniProtKB ID M4K1X5_9PSED
UniRef100 UniRef100_I2BLK5
UniRef50 UniRef50_A8AIT5
UniRef90 UniRef90_Q4KHA5

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal protein S12 methylthiotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -16.15
Kyte-Doolittle Hydrophobicity Value -0.121
Molecular Weight (kDa) 49.6
Isoelectric Point (pI) 4.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000882 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_02895
Search term: rimO

Human Homologs

References

No references are associated with this feature.