Pseudomonas poae RE_1-1-14, H045_02975

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_02975
Name
Replicon chromosome
Genomic location 646303 - 647007 (+ strand)

Cross-References

RefSeq YP_007396167.1
GI 447915599
Entrez 14502399
INSDC AGE24671.1
NCBI Locus Tag H045_02975
UniParc UPI0002A7B1FF
UniProtKB Acc M4JX89
UniProtKB ID M4JX89_9PSED
UniRef100 UniRef100_M4JX89
UniRef50 UniRef50_Q886S5
UniRef90 UniRef90_C3KEB5

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.72
Kyte-Doolittle Hydrophobicity Value -0.251
Molecular Weight (kDa) 26.1
Isoelectric Point (pI) 7.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 74 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001978 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_02975

Human Homologs

References

No references are associated with this feature.