Pseudomonas poae RE_1-1-14, H045_06785

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_06785
Name
Replicon chromosome
Genomic location 1472511 - 1473986 (+ strand)

Cross-References

RefSeq YP_007396925.1
GI 447916357
Entrez 14503157
INSDC AGE25429.1
NCBI Locus Tag H045_06785
UniParc UPI0002AF498D
UniProtKB Acc M4JXY0
UniProtKB ID M4JXY0_9PSED
UniRef100 UniRef100_M4JXY0
UniRef50 UniRef50_Q39Z00
UniRef90 UniRef90_I2BVP7

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein TssC2
Synonyms
Evidence for Translation
Charge (pH 7) -7.91
Kyte-Doolittle Hydrophobicity Value -0.344
Molecular Weight (kDa) 55540.4
Isoelectric Point (pI) 5.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 111 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000083 (1225 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_06785

Human Homologs

References

No references are associated with this feature.