Pseudomonas poae RE_1-1-14, H045_08140

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_08140
Name
Replicon chromosome
Genomic location 1811091 - 1812038 (- strand)

Cross-References

RefSeq YP_007397194.1
GI 447916626
Entrez 14503426
INSDC AGE25698.1
NCBI Locus Tag H045_08140
UniParc UPI0002AF4A21
UniProtKB Acc M4JY38
UniProtKB ID M4JY38_9PSED
UniRef100 UniRef100_M4JY38
UniRef50 UniRef50_Q9I476
UniRef90 UniRef90_M4JY38

Product

Feature Type CDS
Coding Frame 1
Product Name
proline racemase
Synonyms
Evidence for Translation
Charge (pH 7) -6.40
Kyte-Doolittle Hydrophobicity Value 0.008
Molecular Weight (kDa) 33849.1
Isoelectric Point (pI) 6.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 153 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001206 (807 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_08140
Search term: proline racemase

Human Homologs

Ensembl 110, assembly GRCh38.p14
trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
E-value: 2.6e-30
Percent Identity: 30.2

References

No references are associated with this feature.