Pseudomonas poae RE_1-1-14, H045_12000 (infC)

Gene Feature Overview

Strain	Pseudomonas poae RE*1-1-14 GCF_000336465.1|latest
Locus Tag	H045_12000
Name	infC
Replicon	chromosome
Genomic location	2774649 - 2775182 (- strand)

Cross-References

RefSeq	YP_007397961.1
GI	447917393
Entrez	14504193
INSDC	AGE26465.1
NCBI Locus Tag	H045_12000
UniParc	UPI00025E8C12
UniProtKB Acc	M4K739
UniProtKB ID	M4K739_9PSED
UniRef100	UniRef100_I2BL32
UniRef50	UniRef50_Q8XE27
UniRef90	UniRef90_I2BL32

Product

Feature Type	CDS
Coding Frame	1
Product Name	translation initiation factor IF-3
Synonyms
Evidence for Translation
Charge (pH 7)	7.45
Kyte-Doolittle Hydrophobicity Value	-0.569
Molecular Weight (kDa)	20.1
Isoelectric Point (pI)	10.12

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
6VRJ	TRANSLATION	02/07/20	Solution structure of Pseudomonas aeruginosa IF3 C-terminal domain	Pseudomonas aeruginosa	NOT	SOLUTION NMR	92.7

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002828 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H045_12000 Search term: infC Search term: translation initiation factor IF-3

Human Homologs

References