Pseudomonas poae RE_1-1-14, H045_12065

Gene Feature Overview

Strain	Pseudomonas poae RE*1-1-14 GCF_000336465.1|latest
Locus Tag	H045_12065
Name
Replicon	chromosome
Genomic location	2785576 - 2786535 (- strand)

Cross-References

RefSeq	YP_007397974.1
GI	447917406
Entrez	14504206
INSDC	AGE26478.1
NCBI Locus Tag	H045_12065
UniParc	UPI0002A78C3C
UniProtKB Acc	M4K036
UniProtKB ID	M4K036_9PSED
UniRef100	UniRef100_M4K036
UniRef50	UniRef50_D8NLQ8
UniRef90	UniRef90_I4K3J9

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative ribose transporter substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.24
Kyte-Doolittle Hydrophobicity Value	0.081
Molecular Weight (kDa)	33.3
Isoelectric Point (pI)	8.74

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 337 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003485 (487 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H045_12065 Search term: putative ribose transporter substrate-binding protein

Human Homologs

References