Pseudomonas poae RE_1-1-14, H045_13520
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest |
| Locus Tag |
H045_13520
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3126085 - 3127431 (- strand) |
Cross-References
| RefSeq | YP_007398265.1 |
| GI | 447917697 |
| Entrez | 14504497 |
| NCBI Locus Tag | H045_13520 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent RNA helicase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 22.64 |
| Kyte-Doolittle Hydrophobicity Value | -0.298 |
| Molecular Weight (kDa) | 49441.0 |
| Isoelectric Point (pI) | 10.49 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002174 (538 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H045_13520
Search term: ATP-dependent RNA helicase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value:
1.7e-59
Percent Identity:
37.9
|
References
No references are associated with this feature.