Pseudomonas poae RE_1-1-14, H045_15150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_15150
Name
Replicon chromosome
Genomic location 3468456 - 3469802 (- strand)

Cross-References

RefSeq YP_007398591.1
GI 447918023
Entrez 14504823
INSDC AGE27095.1
NCBI Locus Tag H045_15150
UniParc UPI0002A78F53
UniProtKB Acc M4K8S6
UniProtKB ID M4K8S6_9PSED
UniRef100 UniRef100_M4K8S6
UniRef50 UniRef50_Q51485
UniRef90 UniRef90_I4K2Q7

Product

Feature Type CDS
Coding Frame 1
Product Name
putative porin
Synonyms
Evidence for Translation
Charge (pH 7) -3.45
Kyte-Doolittle Hydrophobicity Value -0.506
Molecular Weight (kDa) 49.6
Isoelectric Point (pI) 6.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 47 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002430 (700 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_15150
Search term: putative porin

Human Homologs

References

No references are associated with this feature.