Pseudomonas poae RE_1-1-14, H045_15895

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_15895
Name
Replicon chromosome
Genomic location 3627275 - 3628651 (- strand)

Cross-References

RefSeq YP_007398740.1
GI 447918172
Entrez 14504972
INSDC AGE27244.1
NCBI Locus Tag H045_15895
UniParc UPI00025E91AE
UniProtKB Acc M4K2M0
UniProtKB ID M4K2M0_9PSED
UniRef100 UniRef100_I2BPR5
UniRef50 UniRef50_P0AGD9
UniRef90 UniRef90_Q4KHQ9

Product

Feature Type CDS
Coding Frame 1
Product Name
signal recognition particle protein
Synonyms
Evidence for Translation
Charge (pH 7) 12.23
Kyte-Doolittle Hydrophobicity Value -0.149
Molecular Weight (kDa) 49.3
Isoelectric Point (pI) 10.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001936 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_15895

Human Homologs

Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.9e-42
Percent Identity: 29.8
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.9e-42
Percent Identity: 29.8
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.9e-42
Percent Identity: 29.8
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.9e-42
Percent Identity: 29.8

References

No references are associated with this feature.