Pseudomonas poae RE_1-1-14, H045_17920 (rplO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_17920
Name
rplO
Replicon chromosome
Genomic location 4104231 - 4104668 (- strand)

Cross-References

RefSeq YP_007399142.1
GI 447918574
Entrez 14505374
INSDC AGE27646.1
NCBI Locus Tag H045_17920
UniParc UPI00019DADB4
UniProtKB Acc M4K534
UniProtKB ID M4K534_9PSED
UniRef100 UniRef100_C3K2V7
UniRef50 UniRef50_B1KMW4
UniRef90 UniRef90_Q48D55

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L15
Synonyms
Evidence for Translation
Charge (pH 7) 12.71
Kyte-Doolittle Hydrophobicity Value -0.450
Molecular Weight (kDa) 15.2
Isoelectric Point (pI) 11.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 593 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001466 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_17920
Search term: rplO

Human Homologs

References

No references are associated with this feature.