Pseudomonas poae RE_1-1-14, H045_19070

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_19070
Name
Replicon chromosome
Genomic location 4357834 - 4358553 (+ strand)

Cross-References

RefSeq YP_007399372.1
GI 447918804
Entrez 14505604
INSDC AGE27876.1
NCBI Locus Tag H045_19070
UniParc UPI0002A79D76
UniProtKB Acc M4K5U0
UniProtKB ID M4K5U0_9PSED
UniRef100 UniRef100_M4K5U0
UniRef50 UniRef50_S6AC35
UniRef90 UniRef90_C3K3H4

Product

Feature Type CDS
Coding Frame 1
Product Name
16S ribosomal RNA methyltransferase RsmE
Synonyms
Evidence for Translation
Charge (pH 7) -3.92
Kyte-Doolittle Hydrophobicity Value -0.125
Molecular Weight (kDa) 26.3
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 534 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000410 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_19070

Human Homologs

References

No references are associated with this feature.