Pseudomonas poae RE_1-1-14, H045_19680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_19680
Name
Replicon chromosome
Genomic location 4478789 - 4479427 (- strand)

Cross-References

RefSeq YP_007399494.1
GI 447918926
Entrez 14505726
INSDC AGE27998.1
NCBI Locus Tag H045_19680
UniParc UPI0002A788EA
UniProtKB Acc M4K4F0
UniProtKB ID M4K4F0_9PSED
UniRef100 UniRef100_M4K4F0
UniRef50 UniRef50_Q54SE2
UniRef90 UniRef90_G8Q4S4

Product

Feature Type CDS
Coding Frame 1
Product Name
thiol-specific antioxidant protein LsfA
Synonyms
Evidence for Translation
Charge (pH 7) -4.11
Kyte-Doolittle Hydrophobicity Value -0.396
Molecular Weight (kDa) 24.0
Isoelectric Point (pI) 6.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 579 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002190 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_19680

Human Homologs

Ensembl 110, assembly GRCh38.p14
peroxiredoxin 6 [Source:HGNC Symbol;Acc:HGNC:16753]
E-value: 4.3e-61
Percent Identity: 53.8

References

No references are associated with this feature.