Pseudomonas poae RE_1-1-14, H045_20430
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest |
| Locus Tag |
H045_20430
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4635770 - 4637629 (+ strand) |
Cross-References
| RefSeq | YP_007399644.1 |
| GI | 447919076 |
| Entrez | 14505876 |
| INSDC | AGE28148.1 |
| NCBI Locus Tag | H045_20430 |
| UniParc | UPI0002AF4781 |
| UniProtKB Acc | M4K4V5 |
| UniProtKB ID | M4K4V5_9PSED |
| UniRef100 | UniRef100_M4K4V5 |
| UniRef50 | UniRef50_Q4K3N4 |
| UniRef90 | UniRef90_Q4K3N4 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein TssF
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.39 |
| Kyte-Doolittle Hydrophobicity Value | -0.269 |
| Molecular Weight (kDa) | 69233.0 |
| Isoelectric Point (pI) | 7.40 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 104 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000087 (1252 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H045_20430
Search term: type VI secretion protein TssF
|
Human Homologs
References
No references are associated with this feature.