Pseudomonas poae RE_1-1-14, H045_21005

Gene Feature Overview

Strain	Pseudomonas poae RE*1-1-14 GCF_000336465.1|latest
Locus Tag	H045_21005
Name
Replicon	chromosome
Genomic location	4761964 - 4763856 (- strand)

Cross-References

RefSeq	YP_007399759.1
GI	447919191
Entrez	14505991
INSDC	AGE28263.1
NCBI Locus Tag	H045_21005
UniParc	UPI0002A787F5
UniProtKB Acc	M4K574
UniProtKB ID	M4K574_9PSED
UniRef100	UniRef100_M4K574
UniRef50	UniRef50_Q4K399
UniRef90	UniRef90_Q4K399

Product

Feature Type	CDS
Coding Frame	1
Product Name	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Synonyms
Evidence for Translation
Charge (pH 7)	-1.99
Kyte-Doolittle Hydrophobicity Value	-0.259
Molecular Weight (kDa)	69.0
Isoelectric Point (pI)	6.71

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 508 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005096 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H045_21005 Search term: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000419561 mitochondrial tRNA translation optimization 1 [Source:HGNC Symbol;Acc:HGNC:19261] E-value: 2.1e-148 Percent Identity: 46.3

References