Pseudomonas poae RE_1-1-14, H045_22045

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_22045
Name
Replicon chromosome
Genomic location 5016724 - 5017911 (- strand)

Cross-References

RefSeq YP_007399965.1
GI 447919397
Entrez 14506197
INSDC AGE28469.1
NCBI Locus Tag H045_22045
UniParc UPI0002AF4D00
UniProtKB Acc M4K676
UniProtKB ID M4K676_9PSED
UniRef100 UniRef100_M4K676
UniRef50 UniRef50_R4WHK2
UniRef90 UniRef90_M4K676

Product

Feature Type CDS
Coding Frame 1
Product Name
major facilitator family transporter
Synonyms
Evidence for Translation
Charge (pH 7) 14.48
Kyte-Doolittle Hydrophobicity Value 0.862
Molecular Weight (kDa) 41988.8
Isoelectric Point (pI) 10.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 184 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000270 (1361 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_22045

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 16 member 13 [Source:HGNC Symbol;Acc:HGNC:31037]
E-value: 2.8e-05
Percent Identity: 25.3

References

No references are associated with this feature.