Pseudomonas poae RE_1-1-14, H045_23265

Gene Feature Overview

Strain	Pseudomonas poae RE*1-1-14 GCF_000336465.1|latest
Locus Tag	H045_23265
Name
Replicon	chromosome
Genomic location	5315177 - 5316982 (+ strand)

Cross-References

RefSeq	YP_007400207.1
GI	447919639
Entrez	14506439
INSDC	AGE28711.1
NCBI Locus Tag	H045_23265
UniParc	UPI0002A7BAE9
UniProtKB Acc	M4K803
UniProtKB ID	M4K803_9PSED
UniRef100	UniRef100_M4K803
UniRef50	UniRef50_Q9HUG8
UniRef90	UniRef90_I2BZI0

Product

Feature Type	CDS
Coding Frame	1
Product Name	lipid A export ATP-binding/permease protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.14
Kyte-Doolittle Hydrophobicity Value	0.179
Molecular Weight (kDa)	66.0
Isoelectric Point (pI)	7.23

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004607 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H045_23265 Search term: lipid A export ATP-binding/permease protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000376234 ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50] E-value: 2.8e-81 Percent Identity: 34.2
Ensembl 110, assembly GRCh38.p14	ENSP00000440288 ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50] E-value: 2.8e-81 Percent Identity: 34.2
Ensembl 110, assembly GRCh38.p14	ENSP00000280560 ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50] E-value: 2.8e-81 Percent Identity: 34.2

References