Pseudomonas poae RE_1-1-14, H045_23275
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest |
| Locus Tag |
H045_23275
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5318527 - 5319456 (+ strand) |
Cross-References
| RefSeq | YP_007400209.1 |
| GI | 447919641 |
| Entrez | 14506441 |
| INSDC | AGE28713.1 |
| NCBI Locus Tag | H045_23275 |
| UniParc | UPI0002A78980 |
| UniProtKB Acc | M4K6G2 |
| UniProtKB ID | M4K6G2_9PSED |
| UniRef100 | UniRef100_M4K6G2 |
| UniRef50 | UniRef50_K9NPM9 |
| UniRef90 | UniRef90_E2XKB6 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative lipopolysaccharide biosynthesis-related epimerase/dehydratase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.62 |
| Kyte-Doolittle Hydrophobicity Value | -0.012 |
| Molecular Weight (kDa) | 33.0 |
| Isoelectric Point (pI) | 5.64 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 649 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001617 (520 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H045_23275
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value:
5.7e-30
Percent Identity:
30.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value:
5.7e-30
Percent Identity:
30.7
|
References
No references are associated with this feature.