Pseudomonas poae RE_1-1-14, H045_24060

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_24060
Name
Replicon chromosome
Genomic location 5502346 - 5503266 (- strand)

Cross-References

RefSeq YP_007400366.1
GI 447919798
Entrez 14506598
INSDC AGE28870.1
NCBI Locus Tag H045_24060
UniParc UPI0002A78C37
UniProtKB Acc M4KDV6
UniProtKB ID M4KDV6_9PSED
UniRef100 UniRef100_M4KDV6
UniRef50 UniRef50_Q9I6Z9
UniRef90 UniRef90_G8Q655

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.04
Kyte-Doolittle Hydrophobicity Value -0.148
Molecular Weight (kDa) 34.1
Isoelectric Point (pI) 7.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 483 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000131 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_24060

Human Homologs

References

No references are associated with this feature.