Pseudomonas aeruginosa PAO1, PA1511 (vgrG2a)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0033103 protein secretion by the type VI secretion system
IGC
Inferred from Genomic Context

21325275 Reviewed by curator
Cellular Component GO:0033104 type VI protein secretion system complex
IGC
Inferred from Genomic Context

21325275 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.1920.30 221 284 7.2E-79
MobiDBLite mobidb-lite consensus disorder prediction 265 289 -
Gene3D G3DSA:2.40.50.230 IPR037026 Vgr protein, OB-fold domain superfamily 358 456 1.9E-41
Gene3D G3DSA:3.55.50.10 96 187 7.2E-79
Gene3D G3DSA:2.30.110.50 21 328 7.2E-79
Pfam PF13296 Putative type VI secretion system Rhs element Vgr IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain 475 581 6.1E-34
SUPERFAMILY SSF69349 442 493 1.41E-9
SUPERFAMILY SSF69279 9 182 4.0E-47
Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IPR018769 Domain of unknown function DUF2345, Vgr C-terminal 615 759 5.7E-49
Pfam PF05954 Phage late control gene D protein (GPD) 27 327 2.8E-74
MobiDBLite mobidb-lite consensus disorder prediction 265 291 -
SUPERFAMILY SSF69279 197 365 1.7E-31
TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 19 502 3.5E-120
TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 9 493 0.0
SUPERFAMILY SSF69255 364 451 1.02E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.