Pseudomonas aeruginosa PAO1, PA2402 (pvdI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
PvdS binding site 2687199 2687226 -
12207696 Details
PvdS binding site 2687250 2687258 -
12207696 Details
PvdS binding site 2687234 2687257 - ECO:0000314
direct assay evidence used in manual assertion 		23209661 Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: GCGCCTGCGC-N78-GCGCAGGCGC 2672217 2672314 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Inverted repeat: TCCAGCTTGCCG-N11-CGGCAAGCTGGA 2679755 2679789 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Inverted repeat: AACGCCCAAC-N50-GTTGGGCGTT 2682054 2682123 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Inverted repeat: GGCGAGTCGC-N86-GCGACTCGCC 2682909 2683014 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Inverted repeat: GCAGGCGCAG-N9-CTGCGCCTGC 2683725 2683753 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: CAACCTGCCGC-N87-GCGGCAGGTTG 2671474 2671582 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details