Pseudomonas aeruginosa PAO1, PA3007 (lexA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| PsrA binding site | 3367686 | 3367699 | - |
|
15899403 | Details |
| PsrA binding site | 3367699 | 3367712 | - |
|
15899403 | Details |
| LexA binding site | 3367878 | 3367893 | + |
ECO:0000314
direct assay evidence used in manual assertion |
15458417 | Details |
| LexA binding site | 3367857 | 3367876 | + |
ECO:0000314
direct assay evidence used in manual assertion |
15458417 | Details |
| PsrA binding site | 3367700 | 3367713 | - |
ECO:0000314
direct assay evidence used in manual assertion |
24471758 | Details |
| Shine-Dalgarno sequence | 3367677 | 3367680 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GGGCGGCGCG-N13-CGCGCCGCCC | 3368941 | 3368973 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |