Pseudomonas aeruginosa PAO1, PA5304 (dadA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Operons

Operon name: dadA-PA5303 (2 gene members)
Locus Tag Gene Name Description Start End Strand Type
PA5303 conserved hypothetical protein 5971850 5972203 - CDS
Gene Details
PA5304 dadA D-amino acid dehydrogenase, small subunit 5972178 5973476 - CDS
Gene Details
Evidence
Computationally-predicted.
References
DOOR: a database for prokaryotic operons.
Mao F, Dam P, Chou J, Olman V, Xu Y
Nucleic Acids Res. 2009 Jan;37(Database issue):D459-63
PubMed ID: 18988623
Cross-References
DOOR: 14200
Operon name: dadAX (2 gene members)
Experiment Attributes
method: RT-PCR
Locus Tag Gene Name Description Start End Strand Type
PA5302 dadX catabolic alanine racemase 5970686 5971759 - CDS
Gene Details
PA5304 dadA D-amino acid dehydrogenase, small subunit 5972178 5973476 - CDS
Gene Details
Evidence
Transcription unit experimentally validated in a strain of the same species. The start coordinate will often be based on an experimentally validated transcription start site. For protein-coding genes, unless otherwise specified, the stop will be based on the stop codon.
References
Characterization of alanine catabolism in Pseudomonas aeruginosa and its importance for proliferation in vivo.
Boulette ML, Baynham PJ, Jorth PA, Kukavica-Ibrulj I, Longoria A, Barrera K, Levesque RC, Whiteley M
J. Bacteriol. 2009 Oct;191(20):6329-34
PubMed ID: 19666712
Cross-References
PseudoCAP: 41742