Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5386
|
Name |
cdhA
|
Replicon | chromosome |
Genomic location | 6063883 - 6064848 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
Comment | Deletion of cdhA or transposon insertion into the coding sequence results in a strain unable to grow using L-carnitine as a sole carbon source. Deletion of cdhCA results in complete loss of carnitine dehydrogenase activity as measured by carnitine-dependent NADH formation from cytoplasmic extracts. |
RefSeq | NP_254073.1 |
GI | 15600579 |
Affymetrix | PA5386_at |
Entrez | 881645 |
GenBank | AAG08771.1 |
INSDC | AAG08771.1 |
NCBI Locus Tag | PA5386 |
protein_id(GenBank) | gb|AAG08771.1|AE004951_5|gnl|PseudoCAP|PA5386 |
TIGR | NTL03PA05387 |
UniParc | UPI00000C5FD7 |
UniProtKB Acc | Q9HTH8 |
UniProtKB ID | LCDH_PSEAE |
UniRef100 | UniRef100_Q9HTH8 |
UniRef50 | UniRef50_D7URM0 |
UniRef90 | UniRef90_Q9HTH8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
CdhA, Carnitine dehydrogenase
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -7.16 |
Kyte-Doolittle Hydrophobicity Value | 0.089 |
Molecular Weight (kDa) | 34.7 |
Isoelectric Point (pI) | 5.42 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 435 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004945 (484 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5386
Search term: cdhA
Search term: CdhA, Carnitine dehydrogenase
|
Ensembl
110, assembly
GRCh38.p14
|
crystallin lambda 1 [Source:HGNC Symbol;Acc:HGNC:18246]
E-value:
1.7e-32
Percent Identity:
30.2
|