Pseudomonas fluorescens SBW25, PFLU6000 (exbD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU6000
Name
exbD
Replicon chromosome
Genomic location 6555108 - 6555533 (+ strand)

Cross-References

RefSeq YP_002875484.1
GI 229593365
Entrez 7817314
INSDC CAY53534.1
UniParc UPI00019DB07C
UniProtKB Acc C3K488
UniProtKB ID C3K488_PSEFS
UniRef100 UniRef100_A0A0C5JTY9
UniRef50 UniRef50_Q05606
UniRef90 UniRef90_Q4K3Q7

Product

Feature Type CDS
Coding Frame 1
Product Name
biopolymer transport protein ExbD
Synonyms
Evidence for Translation
Charge (pH 7) -5.53
Kyte-Doolittle Hydrophobicity Value 0.140
Molecular Weight (kDa) 15.2
Isoelectric Point (pI) 4.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 327 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017159 (140 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU6000
Search term: exbD

Human Homologs

References

No references are associated with this feature.