Pseudomonas putida GB-1, PputGB1_3356

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_3356
Name
Replicon chromosome
Genomic location 3788196 - 3789524 (+ strand)

Cross-References

RefSeq YP_001669584.1
GI 167034353
Entrez 5871141
INSDC ABY99248.1
NCBI Locus Tag PputGB1_3356
UniParc UPI0000F24F5D
UniProtKB Acc B0KJM0
UniProtKB ID B0KJM0_PSEPG
UniRef100 UniRef100_B0KJM0
UniRef50 UniRef50_I7BCB8
UniRef90 UniRef90_I7BCB8

Product

Feature Type CDS
Coding Frame 1
Product Name
TolC family type I secretion outer membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) -9.36
Kyte-Doolittle Hydrophobicity Value -0.492
Molecular Weight (kDa) 48572.6
Isoelectric Point (pI) 5.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 304 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001200 (760 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_3356

Human Homologs

References

No references are associated with this feature.