Pseudomonas syringae pv. tomato DC3000, PSPTO_0118

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0118
NCBI Old Locus Tag	PSPTO0118
Name	Synonym: PSPTO0118
Replicon	chromosome
Genomic location	141265 - 142917 (+ strand)

Cross-References

RefSeq	NP_789977.1
GI	28867358
Entrez	1181726
INSDC	AAO53672.1
NCBI Locus Tag	PSPTO_0118
NCBI Old Locus Tag	PSPTO0118
UniParc	UPI0000008303
UniProtKB Acc	Q88B99
UniProtKB ID	Q88B99_PSESM
UniRef100	UniRef100_Q88B99
UniRef50	UniRef50_P0AF43
UniRef90	UniRef90_Q88B99

Product

Feature Type	CDS
Coding Frame	1
Product Name	Na/Pi cotransporter family protein
Synonyms
Evidence for Translation
Charge (pH 7)	8.08
Kyte-Doolittle Hydrophobicity Value	0.498
Molecular Weight (kDa)	59.7
Isoelectric Point (pI)	9.60

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 239 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005015 (528 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0118 Search term: Na/Pi cotransporter family protein

Human Homologs

References