Pseudomonas syringae pv. tomato DC3000, PSPTO_0474 (hopAS1)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0474
NCBI Old Locus Tag	PSPTO0474
Name	hopAS1 Synonym: PSPTO0474
Replicon	chromosome
Genomic location	521328 - 522167 (- strand)

Cross-References

RefSeq	NP_790323.1
GI	28867704
Entrez	1182083
INSDC	AAO54018.1
NCBI Locus Tag	PSPTO_0474
NCBI Old Locus Tag	PSPTO0474
UniParc	UPI0000008454
UniProtKB Acc	Q88AB8
UniProtKB ID	Q88AB8_PSESM
UniRef100	UniRef100_Q88AB8
UniRef50	UniRef50_Q88AB8
UniRef90	UniRef90_Q88AB8

Product

Feature Type	CDS
Coding Frame	1
Product Name	type III effector HopAS1
Synonyms
Evidence for Translation
Charge (pH 7)	4.93
Kyte-Doolittle Hydrophobicity Value	-0.577
Molecular Weight (kDa)	30.1
Isoelectric Point (pI)	10.05

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Pathogenic Found only in pathogenic strains Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017269 (5 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0474 Search term: hopAS1 Search term: type III effector HopAS1

Human Homologs

References