Pseudomonas syringae pv. tomato DC3000, PSPTO_0536
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| RhpR binding site | 588673 | 588688 | - |
ECO:0000314
direct assay evidence used in manual assertion |
22275523 | Details |
| Inverted repeat: CAAAACCCCCGGC-N2-GCCGGGGGTTTTG | 588801 | 588828 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 132 | 588800 | 588829 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 133 | 588806 | 588823 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAAGCCGCGCA-N1-TGCGCGGCTTT | 585980 | 586002 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |