Pseudomonas syringae pv. tomato DC3000, PSPTO_2098

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2098
NCBI Old Locus TagPSPTO2098
Name
Synonym: PSPTO2098
Replicon chromosome
Genomic location 2267792 - 2268358 (+ strand)

Cross-References

RefSeq NP_791921.1
GI 28869302
Entrez 1183745
INSDC AAO55616.1
NCBI Locus Tag PSPTO_2098
NCBI Old Locus Tag PSPTO2098
UniParc UPI0000008A6B
UniProtKB Acc Q884J4
UniProtKB ID Q884J4_PSESM
UniRef100 UniRef100_Q884J4
UniRef50 UniRef50_A0A0B7D5U1
UniRef90 UniRef90_Q884J4

Product

Feature Type CDS
Coding Frame 1
Product Name
isochorismatase family protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.66
Kyte-Doolittle Hydrophobicity Value -0.205
Molecular Weight (kDa) 20.6
Isoelectric Point (pI) 6.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 247 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001725 (756 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2098

Human Homologs

References

No references are associated with this feature.