Pseudomonas syringae pv. tomato DC3000, PSPTO_3677

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3677
NCBI Old Locus Tag	PSPTO3677
Name	Synonym: PSPTO3677
Replicon	chromosome
Genomic location	4143416 - 4143700 (+ strand)

Cross-References

RefSeq	NP_793451.1
GI	28870832
Entrez	1185342
INSDC	AAO57146.1
NCBI Locus Tag	PSPTO_3677
NCBI Old Locus Tag	PSPTO3677
UniParc	UPI0000009034
UniProtKB Acc	Q87YW5
UniProtKB ID	Q87YW5_PSESM
UniRef100	UniRef100_Q87YW5
UniRef50	UniRef50_Q87YW5
UniRef90	UniRef90_Q87YW5

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.22
Kyte-Doolittle Hydrophobicity Value	-0.143
Molecular Weight (kDa)	10.8
Isoelectric Point (pI)	10.10

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 78 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018423 (27 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3677

Human Homologs

References