Pseudomonas syringae pv. tomato DC3000, PSPTO_4991

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4991
NCBI Old Locus Tag	PSPTO4991
Name	Synonym: PSPTO4991
Replicon	chromosome
Genomic location	5664844 - 5665974 (- strand)

Cross-References

RefSeq	NP_794724.1
GI	28872105
Entrez	1186676
INSDC	AAO58419.1
NCBI Locus Tag	PSPTO_4991
NCBI Old Locus Tag	PSPTO4991
UniParc	UPI00000094F6
UniProtKB Acc	Q87VE6
UniProtKB ID	Q87VE6_PSESM
UniRef100	UniRef100_Q87VE6
UniRef50	UniRef50_B9TD52
UniRef90	UniRef90_Q87VE6

Product

Feature Type	CDS
Coding Frame	1
Product Name	glycoside hydrolase family protein
Synonyms
Evidence for Translation
Charge (pH 7)	2.68
Kyte-Doolittle Hydrophobicity Value	0.047
Molecular Weight (kDa)	41.4
Isoelectric Point (pI)	7.60

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 605 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001311 (2094 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4991 Search term: glycoside hydrolase family protein

Human Homologs

References