Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0510 (rfaF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0510
Name
rfaF
Replicon chromosome
Genomic location 596351 - 597385 (+ strand)

Cross-References

RefSeq YP_272812.1
GI 71734499
Entrez 3556808
INSDC AAZ34263.1
NCBI Locus Tag PSPPH_0510
UniParc UPI00005751E7
UniProtKB Acc Q48P57
UniProtKB ID Q48P57_PSE14
UniRef100 UniRef100_F3E984
UniRef50 UniRef50_H3RIE0
UniRef90 UniRef90_Q87VD6

Product

Feature Type CDS
Coding Frame 1
Product Name
ADP-heptose--LPS heptosyltransferase II
Synonyms
Evidence for Translation
Charge (pH 7) 1.21
Kyte-Doolittle Hydrophobicity Value -0.070
Molecular Weight (kDa) 38.1
Isoelectric Point (pI) 7.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 315 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004619 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0510
Search term: rfaF

Human Homologs

References

No references are associated with this feature.