Pseudomonas protegens Pf-5, PFL_0107

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0107
Name
Replicon chromosome
Genomic location 109459 - 111420 (- strand)

Cross-References

RefSeq YP_257259.1
GI 70733619
Entrez 3480706
INSDC AAY95524.1
NCBI Locus Tag PFL_0107
UniParc UPI000054CBC9
UniProtKB Acc Q4KKH4
UniProtKB ID Q4KKH4_PSEF5
UniRef100 UniRef100_Q4KKH4
UniRef50 UniRef50_Q9HTA6
UniRef90 UniRef90_Q4KKH4

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.08
Kyte-Doolittle Hydrophobicity Value -0.424
Molecular Weight (kDa) 73532.7
Isoelectric Point (pI) 6.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 16 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005008 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0107

Human Homologs

References

No references are associated with this feature.